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IISER Pune team develops 20-min Covid, Zika test that doesn't need lab for results

IISER Pune team develops 20-min Covid, Zika test that doesn't need lab for results

Time of India12 hours ago

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Pune: A team of researchers from IISER, Pune, have developed a method to enhance sensitivity of RNA "biosensors", which, when mixed with viral samples of Covid or Zika, can produce a colour signal to indicate or rule out infection, within 20 minutes.
The team said the boosting method can be used to create low-cost diagnostic devices that can be quickly transported to regions where there are few labs, personnel or specialized equipment to screen populations. Mass testing was a challenge during the Covid pandemic when scores of districts — especially during 2021's second wave — reported severe shortages of RT-PCR kits, considered the "gold-standard" for reliable Covid diagnoses.
"But RT-PCR machines were not readily available and were centrally located," said Chaitanya Athale, who was part of the IISER team that developed the new method. "Plus, you needed someone to collect samples, run it on the machines and then interpret the results. That's when we saw the need for a low-cost and decentralized test that can be deployed in areas without advanced infrastructure," Athale said.
In many viruses, genetic information is stored in the form of RNA, similar to what DNA is for humans.
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Covid, Zika and Ebola are all RNA viruses. The IISER team developed a modified synthetic RNA sequence known as a 'toehold switch' in the lab, which reacts when it comes in contact with viral RNA to change colour —visible to the naked eye — on a small paper disc. With advances in technology, the team was able to reach detection limits of one picomolar (10 raised to -12).
Picomolar is a unit of concentration commonly used to quantify a certain substance in a solution.
"PCR, by comparison, is much more sensitive, but this method can be used by a minimally trained technician with test results landing in about 20 minutes," Athale said. RT-PCR test results may take a day or two to show, but the time also depends on how burdened a lab is.
Currently, IISER's prototype test works only for Covid and Zika swab samples. A sample dropped onto two discs that will light up accordingly — one, both, or neither — depending on what's present.
The test showed consistent results in IISER's lab in Pune and Chile, where partner scientists helped to develop the test.
The Pune researchers said regulatory approvals and funding would be needed to take the test to clinics, where it can be tested further. "We've exhausted our grants, but we have manpower. Essentially, we have the people and hope to get the support," Athale said.
Others who were part of the test's development team were Tanvi Kale and Rudvi Pednekar. The team's study published in ACS Synthetic Biology, was in collaboration with research teams of Dr Keith Pardee (University of Toronto, Canada) and Dr Fernán Federici (Pontificia Universidad Católica de Chile, Chile).
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Over 100 marine megafauna struggle for survival, despite global protections

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