
Covid-19 in India: Pune NIV identifies and isolates 4 new Omicron sub-variants driving the current surge in cases
The National Institute of Virology (NIV), Pune, announced on Wednesday that it has successfully sequenced and isolated four new sub-variants of the Omicron coronavirus variant. These sub-variants are believed to be driving the recent rise in Covid-19 cases across India.
Dr Naveen Kumar, director of the Pune-based NIV under the Indian Council of Medical Research (ICMR), explained that genome sequencing of samples collected nationwide revealed four distinct Omicron sub-variants: LF.7, XFG, JN.1.16, and NB.1.8.1.
Genomic analysis indicated that the surge in Covid infections was initially caused by the JN.1.16 sub-lineage of Omicron. However, since May, this has been largely replaced by the recombinant XFG variant, which includes LF.7 and LP.81.2 strains.
Dr Kumar emphasised the critical role of genome sequencing and isolation of new variants in assessing vaccine efficacy. 'Isolation is important to replace the existing vaccine strain if needed. Whether this is necessary depends on the severity of the disease caused by these variants,' he said.
So far, the new strains do not appear to cause severe illness. Decisions regarding the development of new vaccines based on currently circulating variants will be made by policymakers after thorough evaluation.
At present, India has two monovalent Omicron-based vaccines available: Biological E Limited's Corbevax and Serum Institute of India's Covovax. The Ministry of Health continues to closely monitor the evolving situation.
As of 18 June, India's active Covid caseload has marginally decreased to 6,483 from 6,837 the previous day. Official sources report that the severity of infections remains low, with most patients managing their illness through home care.
Since 1 January, India has recorded 113 Covid-related deaths, predominantly among individuals with pre-existing health conditions.
Kerala remains the most affected state by Covid-19, followed by Gujarat, Karnataka, and Delhi, according to health ministry data released on Sunday.
In response, all states have been instructed to ensure adequate availability of oxygen supplies, isolation beds, ventilators, and essential medicines to effectively manage Covid cases.
Hashtags

Try Our AI Features
Explore what Daily8 AI can do for you:
Comments
No comments yet...
Related Articles


Time of India
an hour ago
- Time of India
XFG dominant strain, multiple Omicron subvariants spreading in Maharashtra, reveals genome study
Pune: Multiple emerging Covid-19 strains — all Omicron subvariants — were spreading across the state, Maharashtra's genome sequencing surveillance revealed. The latest sequencing data from 184 samples across 10 districts showed XFG as the currently dominant variant with 84 cases. It was followed by 38 unassigned variants, 34 LF.7.9 cases, 27 JN.1 cases and one NB.1.8.1 case detected in Pune. Nine samples from Mumbai were detected with the XFG subvariant, while three others with LF. 7.9. The NB.1.8.1, identified in a 29-year-old woman from Pune, showed high ACE2 affinity and immune evasion, hinting at the variant's potential to dominate future surges as per recent studies. ACE2 acts as a receptor for the spike protein of coronaviruses, allowing the virus to enter host cells. XFG, dominating in Maharashtra, and LF.7.9 are noted for their strong immune escape because of specific mutations, though their lower receptor-binding efficiency may require further adaptations. Dr Rajesh Karyakarte, Maharashtra's genome sequencing coordinator, BJ Medical College, told TOI, "After NB.1.8.1 was identified in Hong Kong as causing a surge in Covid cases, we at BJGMC, Pune, and NIV, Pune, parallelly started sequencing RT-PCR positive Covid-19 samples for the presence of this SARS-CoV-2 variant. by Taboola by Taboola Sponsored Links Sponsored Links Promoted Links Promoted Links You May Like Esse novo alarme com câmera é quase gratuito em Eugenópolis (consulte o preço) Alarmes Undo CSIR-NCL, Pune's study also showed a spike in SARS-CoV-2 signals. Our findings after whole genome sequencing (WGS) revealed XFG to be the most dominant variant in the state, which wasn't a dominant global variant at that time around the world. We also identified LF.7.9 as another major variant in tested samples." Dr Karyakarte said, "The numbers confirm that XFG drove the current surge and not NB.1.8.1 (labelled Variant Under Monitoring [VUM] by WHO). After studying the sequences uploaded on WHO recommended GISAID database, it is clear that NB.1.8.1 is more common in Southeast Asia, while XFG prevails in India, Pakistan and Bangladesh — possibly because of immunity factors. Recently, XFG has also been rising in the US." Dr Ameet Dravid, infectious disease expert, Noble Hospital, said, "XFG is merely an Omicron sub-variant, similar to those in circulation during the third wave in 2022. Thanks to immunity built from previous infections, we're seeing very few severe cases this time. XFG is highly transmissible because of mutations that allow it to spread easily from person to person, leading to many upper respiratory tract infections. Its capacity to damage lungs or cause complications is minimal. So, patients with these symptoms are recovering well with outpatient treatment." Dr Dravid said, "Only a tiny fraction requires admission for pneumonia or ARDS (Acute Respiratory Distress Syndrome), the complications we saw in the first three waves. The damage has been limited despite low vaccination rates and waning vaccine-induced immunity over the last three years. We're relieved there hasn't been a significant surge in Covid admissions. While cases are increasing, most are mild, and improving with symptomatic care like nasal decongestants, cough suppressants and paracetamol for fever or body aches. " Hospitals in the city reported a noticeable uptick in Covid cases this week compared to previous weeks. Daily or alternate-day deaths, mostly among those with pre-existing conditions, have been recorded. The state health data indicated 31 fatalities since January this year — as many as 30 linked to comorbidities and one to another illness. Infectious disease specialists said this trend mirrored past surges. Individuals with underlying health issues remain vulnerable as infections rise. Dr Piyush Chaudhary, infectious disease specialist, Jehangir Hospital, said, "This variant (XFG) appears mild, but even mild strains can lead to some mortality, especially if the number of cases is high. The elderly or those with comorbidities may experience severe outcomes. We also haven't seen worsening severity — patients in ICU were there because of other medical conditions, not Covid itself. We must determine if Covid contributed to deaths or if underlying comorbidities were the primary cause. Currently, it seems, comorbidities, not Covid, are driving severe cases this season. Case numbers are definitely rising, though many with mild symptoms aren't testing. Among those tested, the positivity rate has increased proportionally."


Time of India
2 hours ago
- Time of India
Chhattisgarh records first Covid death of the year
Chhattisgarh has reported its first Covid death this year. An 86-year-old patient, who had multiple comorbidities and was on regular dialysis, died at a private hospital in Raipur on June 14, officials said on Monday. It's the first fatality in the state linked to the JN1 variant, said officials. Chhattisgarh has recorded 118 Covid-19 infections this year. There are 51 active cases in the state. Raipur: Chhattisgarh has reported its first Covid death this year. An 86-year-old patient, who had multiple comorbidities and was on regular dialysis, died at a private hospital in Raipur on June 14, officials said on Monday. It's the first fatality in the state linked to the JN1 variant, said officials. Chhattisgarh has recorded 118 Covid-19 infections this year. There are 51 active cases, of whom 41 are in home isolation, nine are on oxygen support, and one patient is in ICU. According to health officials, the 86-year-old, a native of Rajnandgaon, had multiple comorbidities, including chronic renal failure, hypertension, and interstitial lung disease. His condition worsened, and he tested positive for Covid during routine screening. He died on the same day due to complications related to his health issues, said officials. On Monday, the state reported 10 new cases, including three each from Raipur and Bilaspur, two from Durg and 1 each from Mahasamund and Surguja. The daily growth rate of Covid-19 stands at 23.1%, while the recovery rate is twice that at 56.4%. Health experts predict that the state could see around 50 more cases in the next 10 days, but three patients on average are recovering each day. Health authorities said that they are on alert after the Covid death. The govt has begun training technical and non-technical healthcare staff in district hospitals and health centres in sample collection and patient treatment. Covid cases have been recorded in nine districts - including Raipur, Durg, Bilaspur, Bastar, Surguja, Mahasamund and Bemetara. Health department has urged people with cold and flu symptoms to get tested for Covid.


Time of India
2 hours ago
- Time of India
Lucknow logs 5 new Covid cases, tally reaches 43
Lucknow: Five new Covid-19 cases were reported in the city in the last 24 hours. According to health department officials, the newly infected include a 54-year-old woman from Krishnanagar, an 81-year-old man from Dilkusha and a 75-year-old man from Rana Pratap Marg. Tired of too many ads? go ad free now A 55-year-old man from New Hyderabad and a 27-year-old man from Hazratganj also tested positive. The district health team has begun contact tracing and is collecting samples from family members and close contacts of the patients. So far, 43 cases were confirmed in Lucknow, with 20 active cases currently under observation. The remaining 23 patients recovered. Health officials are monitoring the condition of the active cases and ensuring the availability of necessary medications. Despite ongoing containment efforts, the continuous spike in cases has put the health department on alert. Officials admit that the virus containment strategies need to be further strengthened.